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    An improved chromosome sorting algorithm by permutation group-based inverted block-interchanges

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    Date
    2016-12
    Publisher
    © 2016 IEEE
    Author
    Tabassum, Afrida
    Abdullah, Wali Mohammad
    Manjur, Najia
    Islam, Rehennuma
    Ahmed, Ashfaque Uddin
    Morshed, Shourav Imtiaz
    Tinni, Rizia Iqbal
    Kabir, Kazi Lutful
    Islam, Muhammad Nazrul
    Metadata
    Show full item record
    URI
    http://hdl.handle.net/10361/9517
    Citation
    Tabassum, A., Abdullah, W. M., Manjur, N., Islam, R., Ahmed, A., Morshed, S. I., . . . Islam, M. N. (2017). An improved chromosome sorting algorithm by permutation group-based inverted block-interchanges. Paper presented at the 1st International Conference on Medical Engineering, Health Informatics and Technology, MediTec 2016, 10.1109/MEDITEC.2016.7835373
    Abstract
    In comparative genomics, a common issue is to find the shortest course of operations for the transformation of one genome into another. During rejoining the blocks, inverted block interchange, a more distinct form of block interchange, gives the option to the blocks to reverse their orientation. In this particular paper, we have presented an improved algorithm to sort circular chromosomes by inverted block interchanges and also compared the performances with a previous algorithm. Our experimental findings justify the fact that accommodation of inverted block interchange ensures results with equal or less number of series of operations in terms of block interchanges.
    Keywords
    Chromosome; Genome; Inverted block interchange; Permutation group
     
    Description
    This conference paper was published in the IEEE Xplore [© 2016 IEEE] and the definite version is available at : http://doi.org/10.1109/MEDITEC.2016.7835373 The Journal's website is at: http://ieeexplore.ieee.org/document/7835373/
    Publisher Link
    http://ieeexplore.ieee.org/document/7835373/
    DOI
    http://doi.org/10.1109/MEDITEC.2016.7835373
    Department
    Department of Computer Science and Engineering, BRAC University
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